Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgn1P18608 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Hmgn1P18608 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Hmgn1P18608 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgn1P18608 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Gm29707-201ENSMUST00000196325 491 ntBASIC14.7□□□□□ -0.06
Hmgn1P18608 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgn1P18608 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgn1P18608 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.69□□□□□ -0.06
Hmgn1P18608 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.69□□□□□ -0.06
Hmgn1P18608 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.69□□□□□ -0.06
Hmgn1P18608 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgn1P18608 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Hmgn1P18608 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgn1P18608 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.69□□□□□ -0.06
Hmgn1P18608 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgn1P18608 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.68□□□□□ -0.06
Hmgn1P18608 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgn1P18608 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hmgn1P18608 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms