Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.2■□□□□ 0.5
Kcna1P16388 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcna1P16388 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcna1P16388 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Kcna1P16388 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.19■□□□□ 0.5
Kcna1P16388 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Gm11452-201ENSMUST00000122376 690 ntBASIC18.19■□□□□ 0.5
Kcna1P16388 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.19■□□□□ 0.5
Kcna1P16388 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.19■□□□□ 0.5
Kcna1P16388 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.19■□□□□ 0.5
Kcna1P16388 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.19■□□□□ 0.5
Kcna1P16388 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcna1P16388 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Gm4459-201ENSMUST00000118750 468 ntBASIC18.18■□□□□ 0.5
Kcna1P16388 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.18■□□□□ 0.5
Kcna1P16388 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.18■□□□□ 0.5
Kcna1P16388 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.18■□□□□ 0.5
Kcna1P16388 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcna1P16388 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.18■□□□□ 0.5
Kcna1P16388 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.18■□□□□ 0.5
Kcna1P16388 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Kcna1P16388 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.17■□□□□ 0.5
Kcna1P16388 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Gm13884-201ENSMUST00000118103 829 ntBASIC18.17■□□□□ 0.5
Kcna1P16388 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.17■□□□□ 0.5
Kcna1P16388 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Kcna1P16388 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.17■□□□□ 0.5
Kcna1P16388 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kcna1P16388 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Kcna1P16388 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcna1P16388 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Kcna1P16388 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Kcna1P16388 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Kcna1P16388 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.16■□□□□ 0.5
Kcna1P16388 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcna1P16388 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.15■□□□□ 0.5
Kcna1P16388 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Kcna1P16388 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Kcna1P16388 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Kcna1P16388 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.15■□□□□ 0.5
Kcna1P16388 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Kcna1P16388 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.15■□□□□ 0.5
Kcna1P16388 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.15■□□□□ 0.5
Kcna1P16388 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms