Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gm11780-201ENSMUST00000136880 516 ntBASIC18.53■□□□□ 0.56
Usp53P15975 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp53P15975 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Usp53P15975 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Gm18195-201ENSMUST00000207604 706 ntBASIC18.53■□□□□ 0.56
Usp53P15975 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Usp53P15975 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp53P15975 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp53P15975 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Usp53P15975 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.52■□□□□ 0.56
Usp53P15975 Gm18733-201ENSMUST00000173950 856 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Gm2651-201ENSMUST00000203560 838 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.52■□□□□ 0.56
Usp53P15975 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Gm10060-201ENSMUST00000212002 111 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Gm8655-201ENSMUST00000221159 852 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 Haglr-201ENSMUST00000100000 2085 ntBASIC18.52■□□□□ 0.56
Usp53P15975 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp53P15975 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Usp53P15975 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp53P15975 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp53P15975 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Usp53P15975 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp53P15975 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Usp53P15975 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.51■□□□□ 0.55
Usp53P15975 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 AW822252-206ENSMUST00000208904 237 ntBASIC18.51■□□□□ 0.55
Usp53P15975 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Usp53P15975 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp53P15975 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.5■□□□□ 0.55
Usp53P15975 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.5■□□□□ 0.55
Usp53P15975 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Usp53P15975 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp53P15975 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Usp53P15975 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp53P15975 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Usp53P15975 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.49■□□□□ 0.55
Usp53P15975 Gm8825-201ENSMUST00000182565 998 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms