Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim30aP15533 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim30aP15533 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim30aP15533 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
Trim30aP15533 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Trim30aP15533 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trim30aP15533 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.71■□□□□ 0.43
Trim30aP15533 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim30aP15533 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim30aP15533 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim30aP15533 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Trim30aP15533 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim30aP15533 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Gm6576-201ENSMUST00000169678 883 ntBASIC17.7■□□□□ 0.42
Trim30aP15533 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.7■□□□□ 0.42
Trim30aP15533 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30aP15533 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim30aP15533 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim30aP15533 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Gm43017-201ENSMUST00000198296 752 ntBASIC17.69■□□□□ 0.42
Trim30aP15533 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Gm6139-201ENSMUST00000079261 882 ntBASIC17.69■□□□□ 0.42
Trim30aP15533 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30aP15533 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30aP15533 Flg-201ENSMUST00000050758 1488 ntBASIC17.69■□□□□ 0.42
Trim30aP15533 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim30aP15533 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim30aP15533 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim30aP15533 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
Trim30aP15533 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim30aP15533 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Trim30aP15533 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30aP15533 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trim30aP15533 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim30aP15533 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30aP15533 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms