Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccl3P10855 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccl3P10855 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccl3P10855 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ccl3P10855 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccl3P10855 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl3P10855 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl3P10855 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccl3P10855 Chchd1-203ENSMUST00000224633 557 ntBASIC14.14□□□□□ -0.15
Ccl3P10855 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccl3P10855 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccl3P10855 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccl3P10855 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccl3P10855 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.13□□□□□ -0.15
Ccl3P10855 Gm17271-201ENSMUST00000165535 355 ntBASIC14.13□□□□□ -0.15
Ccl3P10855 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.13□□□□□ -0.15
Ccl3P10855 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccl3P10855 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccl3P10855 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccl3P10855 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl3P10855 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.12□□□□□ -0.15
Ccl3P10855 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Gm15358-201ENSMUST00000119249 520 ntBASIC14.12□□□□□ -0.15
Ccl3P10855 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.12□□□□□ -0.15
Ccl3P10855 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl3P10855 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl3P10855 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms