Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
P01808 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.53□□□□□ -0.08
P01808 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.53□□□□□ -0.08
P01808 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.53□□□□□ -0.08
P01808 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
P01808 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01808 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.52□□□□□ -0.08
P01808 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.52□□□□□ -0.08
P01808 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
P01808 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.52□□□□□ -0.08
P01808 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P01808 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.52□□□□□ -0.09
P01808 Gm44454-201ENSMUST00000198541 138 ntBASIC14.52□□□□□ -0.09
P01808 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.52□□□□□ -0.09
P01808 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.52□□□□□ -0.09
P01808 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
P01808 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
P01808 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01808 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
P01808 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
P01808 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
P01808 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
P01808 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
P01808 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
P01808 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
P01808 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.51□□□□□ -0.09
P01808 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.51□□□□□ -0.09
P01808 Gm18669-201ENSMUST00000216049 778 ntBASIC14.51□□□□□ -0.09
P01808 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.51□□□□□ -0.09
P01808 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
P01808 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01808 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
P01808 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
P01808 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.5□□□□□ -0.09
P01808 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.5□□□□□ -0.09
P01808 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.5□□□□□ -0.09
P01808 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.5□□□□□ -0.09
P01808 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.5□□□□□ -0.09
P01808 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.5□□□□□ -0.09
P01808 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.5□□□□□ -0.09
P01808 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.5□□□□□ -0.09
P01808 Gm10819-201ENSMUST00000099988 561 ntBASIC14.5□□□□□ -0.09
P01808 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01808 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms