Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
P01739 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.12□□□□□ -0.47
P01739 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
P01739 Gm6433-201ENSMUST00000118634 875 ntBASIC12.12□□□□□ -0.47
P01739 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.12□□□□□ -0.47
P01739 Gm22697-201ENSMUST00000175194 63 ntBASIC12.12□□□□□ -0.47
P01739 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
P01739 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.12□□□□□ -0.47
P01739 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P01739 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P01739 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.11□□□□□ -0.47
P01739 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P01739 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
P01739 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
P01739 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Gm18101-201ENSMUST00000215769 548 ntBASIC12.11□□□□□ -0.47
P01739 Gm21559-201ENSMUST00000220638 855 ntBASIC12.11□□□□□ -0.47
P01739 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Gm8587-201ENSMUST00000076538 843 ntBASIC12.11□□□□□ -0.47
P01739 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P01739 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01739 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P01739 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.11□□□□□ -0.47
P01739 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01739 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.1□□□□□ -0.47
P01739 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.1□□□□□ -0.47
P01739 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.1□□□□□ -0.47
P01739 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P01739 Gm37722-201ENSMUST00000193757 208 ntBASIC12.1□□□□□ -0.47
P01739 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P01739 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01739 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01739 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.1□□□□□ -0.47
P01739 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.1□□□□□ -0.47
P01739 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms