Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.38□□□□□ -0.11
Hdac3O88895 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hdac3O88895 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hdac3O88895 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hdac3O88895 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Hdac3O88895 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.37□□□□□ -0.11
Hdac3O88895 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.37□□□□□ -0.11
Hdac3O88895 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hdac3O88895 Gm9987-201ENSMUST00000069768 567 ntBASIC14.37□□□□□ -0.11
Hdac3O88895 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Hdac3O88895 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac3O88895 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hdac3O88895 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Gm22697-201ENSMUST00000175194 63 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Gm44450-201ENSMUST00000199528 114 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Gm18101-201ENSMUST00000215769 548 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Phf7-203ENSMUST00000226565 1971 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hdac3O88895 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.36□□□□□ -0.11
Hdac3O88895 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.36□□□□□ -0.11
Hdac3O88895 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac3O88895 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.35□□□□□ -0.11
Hdac3O88895 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hdac3O88895 Gm29707-201ENSMUST00000196325 491 ntBASIC14.35□□□□□ -0.11
Hdac3O88895 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Gm21559-201ENSMUST00000220638 855 ntBASIC14.35□□□□□ -0.11
Hdac3O88895 Gm18032-201ENSMUST00000222541 538 ntBASIC14.35□□□□□ -0.11
Hdac3O88895 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Gm8587-201ENSMUST00000076538 843 ntBASIC14.35□□□□□ -0.11
Hdac3O88895 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac3O88895 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac3O88895 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms