Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Cops6O88545 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops6O88545 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cops6O88545 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cops6O88545 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops6O88545 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cops6O88545 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.54■□□□□ 0.72
Cops6O88545 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cops6O88545 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cops6O88545 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops6O88545 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cops6O88545 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops6O88545 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops6O88545 Gm8344-201ENSMUST00000119813 856 ntBASIC19.53■□□□□ 0.72
Cops6O88545 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops6O88545 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops6O88545 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.53■□□□□ 0.72
Cops6O88545 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops6O88545 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cops6O88545 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Cops6O88545 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.52■□□□□ 0.72
Cops6O88545 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.52■□□□□ 0.72
Cops6O88545 Gm27702-201ENSMUST00000184512 56 ntBASIC19.52■□□□□ 0.72
Cops6O88545 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.52■□□□□ 0.72
Cops6O88545 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.52■□□□□ 0.72
Cops6O88545 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cops6O88545 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cops6O88545 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops6O88545 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.51■□□□□ 0.71
Cops6O88545 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cops6O88545 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cops6O88545 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cops6O88545 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.51■□□□□ 0.71
Cops6O88545 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cops6O88545 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.51■□□□□ 0.71
Cops6O88545 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops6O88545 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cops6O88545 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cops6O88545 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Cops6O88545 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cops6O88545 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops6O88545 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops6O88545 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.5■□□□□ 0.71
Cops6O88545 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Cops6O88545 Gm15358-201ENSMUST00000119249 520 ntBASIC19.5■□□□□ 0.71
Cops6O88545 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms