Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ubr1O70481 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr1O70481 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 Gm12008-201ENSMUST00000117791 755 ntBASIC20.67■□□□□ 0.9
Ubr1O70481 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr1O70481 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr1O70481 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.67■□□□□ 0.9
Ubr1O70481 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.67■□□□□ 0.9
Ubr1O70481 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.66■□□□□ 0.9
Ubr1O70481 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ubr1O70481 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.66■□□□□ 0.9
Ubr1O70481 Gm8396-201ENSMUST00000057361 823 ntBASIC20.66■□□□□ 0.9
Ubr1O70481 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr1O70481 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Ubr1O70481 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ubr1O70481 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.65■□□□□ 0.9
Ubr1O70481 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ubr1O70481 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr1O70481 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Ubr1O70481 Gm5312-201ENSMUST00000203728 547 ntBASIC20.64■□□□□ 0.9
Ubr1O70481 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.64■□□□□ 0.9
Ubr1O70481 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr1O70481 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ubr1O70481 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
Ubr1O70481 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Mir1895-201ENSMUST00000122615 79 ntBASIC20.64■□□□□ 0.89
Ubr1O70481 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.64■□□□□ 0.89
Ubr1O70481 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr1O70481 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.63■□□□□ 0.89
Ubr1O70481 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ubr1O70481 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ubr1O70481 Gm13616-201ENSMUST00000120600 222 ntBASIC20.63■□□□□ 0.89
Ubr1O70481 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.63■□□□□ 0.89
Ubr1O70481 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ubr1O70481 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr1O70481 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ubr1O70481 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ubr1O70481 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.62■□□□□ 0.89
Ubr1O70481 Rpph1-201ENSMUST00000175096 319 ntBASIC20.62■□□□□ 0.89
Ubr1O70481 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ubr1O70481 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.62■□□□□ 0.89
Ubr1O70481 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ubr1O70481 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Gm16198-201ENSMUST00000118766 670 ntBASIC20.62■□□□□ 0.89
Ubr1O70481 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.62■□□□□ 0.89
Ubr1O70481 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr1O70481 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms