Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.6□□□□□ -0.07
Alx3O70137 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Gm36967-201ENSMUST00000193814 266 ntBASIC14.6□□□□□ -0.07
Alx3O70137 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Gm18421-201ENSMUST00000204122 625 ntBASIC14.6□□□□□ -0.07
Alx3O70137 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Alx3O70137 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Alx3O70137 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.6□□□□□ -0.07
Alx3O70137 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx3O70137 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.59□□□□□ -0.07
Alx3O70137 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Alx3O70137 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.59□□□□□ -0.07
Alx3O70137 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gm19087-201ENSMUST00000191430 946 ntBASIC14.59□□□□□ -0.07
Alx3O70137 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.59□□□□□ -0.07
Alx3O70137 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.59□□□□□ -0.07
Alx3O70137 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.59□□□□□ -0.07
Alx3O70137 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Alx3O70137 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Alx3O70137 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx3O70137 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx3O70137 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx3O70137 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx3O70137 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx3O70137 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Alx3O70137 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Alx3O70137 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Alx3O70137 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Alx3O70137 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Alx3O70137 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Gm11336-201ENSMUST00000118168 334 ntBASIC14.58□□□□□ -0.08
Alx3O70137 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Alx3O70137 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Alx3O70137 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.58□□□□□ -0.08
Alx3O70137 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Alx3O70137 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Alx3O70137 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Alx3O70137 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Alx3O70137 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.58□□□□□ -0.08
Alx3O70137 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.58□□□□□ -0.08
Alx3O70137 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Alx3O70137 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Alx3O70137 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.57□□□□□ -0.08
Alx3O70137 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Alx3O70137 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
Alx3O70137 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms