Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Gm27704-201ENSMUST00000185094 107 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Ank2-226ENSMUST00000189368 339 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Gm29518-201ENSMUST00000190858 372 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Gm17808-201ENSMUST00000200859 894 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Rdh5O55240 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.22■□□□□ 0.03
Rdh5O55240 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.22■□□□□ 0.03
Rdh5O55240 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh5O55240 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh5O55240 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh5O55240 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh5O55240 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh5O55240 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh5O55240 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh5O55240 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh5O55240 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh5O55240 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.2■□□□□ 0.02
Rdh5O55240 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rdh5O55240 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.2■□□□□ 0.02
Rdh5O55240 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh5O55240 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rdh5O55240 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.19■□□□□ 0.02
Rdh5O55240 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.19■□□□□ 0.02
Rdh5O55240 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.19■□□□□ 0.02
Rdh5O55240 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rdh5O55240 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh5O55240 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms