Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Phox2bO35690 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.1■□□□□ 0.17
Phox2bO35690 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.1■□□□□ 0.17
Phox2bO35690 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Phox2bO35690 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Phox2bO35690 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.1■□□□□ 0.17
Phox2bO35690 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Phox2bO35690 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.09■□□□□ 0.17
Phox2bO35690 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.09■□□□□ 0.17
Phox2bO35690 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Phox2bO35690 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Phox2bO35690 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.09■□□□□ 0.17
Phox2bO35690 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Phox2bO35690 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Phox2bO35690 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Phox2bO35690 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.08■□□□□ 0.17
Phox2bO35690 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Phox2bO35690 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.08■□□□□ 0.16
Phox2bO35690 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.08■□□□□ 0.16
Phox2bO35690 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Phox2bO35690 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.08■□□□□ 0.16
Phox2bO35690 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Phox2bO35690 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.08■□□□□ 0.16
Phox2bO35690 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.08■□□□□ 0.16
Phox2bO35690 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Phox2bO35690 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Phox2bO35690 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.07■□□□□ 0.16
Phox2bO35690 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Phox2bO35690 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Gm18515-201ENSMUST00000219755 797 ntBASIC16.07■□□□□ 0.16
Phox2bO35690 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Phox2bO35690 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Phox2bO35690 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.07■□□□□ 0.16
Phox2bO35690 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Phox2bO35690 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phox2bO35690 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phox2bO35690 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phox2bO35690 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phox2bO35690 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.06■□□□□ 0.16
Phox2bO35690 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phox2bO35690 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms