Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Npc1O35604 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Npc1O35604 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Npc1O35604 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Npc1O35604 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Npc1O35604 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.66■□□□□ 0.1
Npc1O35604 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.66■□□□□ 0.1
Npc1O35604 Gm36967-201ENSMUST00000193814 266 ntBASIC15.66■□□□□ 0.1
Npc1O35604 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.66■□□□□ 0.1
Npc1O35604 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.66■□□□□ 0.1
Npc1O35604 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Npc1O35604 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Npc1O35604 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Npc1O35604 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.65■□□□□ 0.1
Npc1O35604 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Npc1O35604 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Npc1O35604 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Npc1O35604 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Npc1O35604 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.65■□□□□ 0.1
Npc1O35604 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Npc1O35604 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.65■□□□□ 0.1
Npc1O35604 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Npc1O35604 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.64■□□□□ 0.09
Npc1O35604 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Npc1O35604 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.64■□□□□ 0.09
Npc1O35604 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.64■□□□□ 0.09
Npc1O35604 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.64■□□□□ 0.09
Npc1O35604 Gm44454-201ENSMUST00000198541 138 ntBASIC15.64■□□□□ 0.09
Npc1O35604 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.64■□□□□ 0.09
Npc1O35604 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Birc2-201ENSMUST00000054878 378 ntBASIC15.64■□□□□ 0.09
Npc1O35604 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Npc1O35604 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npc1O35604 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Npc1O35604 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Npc1O35604 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
Npc1O35604 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.63■□□□□ 0.09
Npc1O35604 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Npc1O35604 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.63■□□□□ 0.09
Npc1O35604 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Npc1O35604 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms