Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Gm6180-201ENSMUST00000065243 498 ntBASIC15.02■□□□□ -0
Abca4O35600 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abca4O35600 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Abca4O35600 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca4O35600 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca4O35600 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.02□□□□□ -0.01
Abca4O35600 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abca4O35600 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.01□□□□□ -0.01
Abca4O35600 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Abca4O35600 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.01□□□□□ -0.01
Abca4O35600 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Abca4O35600 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.01□□□□□ -0.01
Abca4O35600 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abca4O35600 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Abca4O35600 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Gm8602-201ENSMUST00000184045 607 ntBASIC15□□□□□ -0.01
Abca4O35600 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15□□□□□ -0.01
Abca4O35600 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Abca4O35600 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Gm13517-201ENSMUST00000120782 1495 ntBASIC15□□□□□ -0.01
Abca4O35600 Gm3365-201ENSMUST00000216296 1480 ntBASIC15□□□□□ -0.01
Abca4O35600 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca4O35600 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Abca4O35600 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 Gm27680-201ENSMUST00000184192 160 ntBASIC14.99□□□□□ -0.01
Abca4O35600 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.99□□□□□ -0.01
Abca4O35600 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Abca4O35600 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca4O35600 Gm8410-201ENSMUST00000117225 605 ntBASIC14.99□□□□□ -0.01
Abca4O35600 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.99□□□□□ -0.01
Abca4O35600 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.99□□□□□ -0.01
Abca4O35600 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca4O35600 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Abca4O35600 Gm18489-201ENSMUST00000172565 551 ntBASIC14.98□□□□□ -0.01
Abca4O35600 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Gm6218-201ENSMUST00000219812 628 ntBASIC14.98□□□□□ -0.01
Abca4O35600 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Abca4O35600 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms