Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Mir1895-201ENSMUST00000122615 79 ntBASIC20.46■□□□□ 0.87
Col15a1O35206 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.46■□□□□ 0.87
Col15a1O35206 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Col15a1O35206 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col15a1O35206 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Col15a1O35206 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Col15a1O35206 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Col15a1O35206 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Col15a1O35206 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Col15a1O35206 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.45■□□□□ 0.86
Col15a1O35206 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col15a1O35206 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.45■□□□□ 0.86
Col15a1O35206 Gm13365-201ENSMUST00000121188 973 ntBASIC20.45■□□□□ 0.86
Col15a1O35206 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.45■□□□□ 0.86
Col15a1O35206 Mir6956-201ENSMUST00000183598 62 ntBASIC20.45■□□□□ 0.86
Col15a1O35206 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col15a1O35206 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.45■□□□□ 0.86
Col15a1O35206 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col15a1O35206 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.45■□□□□ 0.86
Col15a1O35206 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.44■□□□□ 0.86
Col15a1O35206 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.44■□□□□ 0.86
Col15a1O35206 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Col15a1O35206 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.44■□□□□ 0.86
Col15a1O35206 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Col15a1O35206 Gm20553-201ENSMUST00000204205 844 ntBASIC20.44■□□□□ 0.86
Col15a1O35206 Gm44872-201ENSMUST00000207864 420 ntBASIC20.44■□□□□ 0.86
Col15a1O35206 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Col15a1O35206 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col15a1O35206 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Col15a1O35206 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col15a1O35206 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.43■□□□□ 0.86
Col15a1O35206 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col15a1O35206 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col15a1O35206 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Gm13616-201ENSMUST00000120600 222 ntBASIC20.43■□□□□ 0.86
Col15a1O35206 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.43■□□□□ 0.86
Col15a1O35206 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.43■□□□□ 0.86
Col15a1O35206 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col15a1O35206 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.43■□□□□ 0.86
Col15a1O35206 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col15a1O35206 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Grk6-207ENSMUST00000225925 2769 ntBASIC20.42■□□□□ 0.86
Col15a1O35206 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.42■□□□□ 0.86
Col15a1O35206 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.42■□□□□ 0.86
Col15a1O35206 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Col15a1O35206 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Col15a1O35206 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col15a1O35206 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.41■□□□□ 0.86
Col15a1O35206 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.41■□□□□ 0.86
Col15a1O35206 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col15a1O35206 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Col15a1O35206 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms