Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Gm13474-201ENSMUST00000122466 815 ntBASIC13.64□□□□□ -0.23
BC035044E0CXF8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Gm26039-201ENSMUST00000158152 144 ntBASIC13.64□□□□□ -0.23
BC035044E0CXF8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BC035044E0CXF8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.63□□□□□ -0.23
BC035044E0CXF8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Gm27011-201ENSMUST00000182352 972 ntBASIC13.63□□□□□ -0.23
BC035044E0CXF8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BC035044E0CXF8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Gm13559-201ENSMUST00000120476 863 ntBASIC13.62□□□□□ -0.23
BC035044E0CXF8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BC035044E0CXF8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.61□□□□□ -0.23
BC035044E0CXF8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.61□□□□□ -0.23
BC035044E0CXF8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms