Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.13■□□□□ 0.17
Gm28043E0CXC2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.13■□□□□ 0.17
Gm28043E0CXC2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gm28043E0CXC2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm28043E0CXC2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28043E0CXC2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms