Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.76■□□□□ 0.59
Usp42B2RQC2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.76■□□□□ 0.59
Usp42B2RQC2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.76■□□□□ 0.59
Usp42B2RQC2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp42B2RQC2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Gm25745-201ENSMUST00000174945 133 ntBASIC18.74■□□□□ 0.59
Usp42B2RQC2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp42B2RQC2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.74■□□□□ 0.59
Usp42B2RQC2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.74■□□□□ 0.59
Usp42B2RQC2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.73■□□□□ 0.59
Usp42B2RQC2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Gm6257-201ENSMUST00000163864 910 ntBASIC18.73■□□□□ 0.59
Usp42B2RQC2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp42B2RQC2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Gm9172-201ENSMUST00000212092 954 ntBASIC18.72■□□□□ 0.59
Usp42B2RQC2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp42B2RQC2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms