Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Gm16061-201ENSMUST00000122167 857 ntBASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv29A0A0G2LB96 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Gm15039-201ENSMUST00000118914 875 ntBASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv29A0A0G2LB96 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv29A0A0G2LB96 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv29A0A0G2LB96 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Gm2274-201ENSMUST00000184539 609 ntBASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv29A0A0G2LB96 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv29A0A0G2LB96 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms