Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Phf7-203ENSMUST00000226565 1971 ntBASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Flg-201ENSMUST00000050758 1488 ntBASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm45203-201ENSMUST00000206384 1831 ntBASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm6139-201ENSMUST00000079261 882 ntBASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igkv8-27A0A0G2JF28 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Igkv8-27A0A0G2JF28 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms