Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm18958-201ENSMUST00000174258 762 ntBASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv3A0A0A6YYE2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv3A0A0A6YYE2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv3A0A0A6YYE2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv3A0A0A6YYE2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv3A0A0A6YYE2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv3A0A0A6YYE2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms