Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gm15794-201ENSMUST00000120182 631 ntBASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.37□□□□□ -0.43
Trav6-4A0A075B6B4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-4A0A075B6B4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-4A0A075B6B4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms