Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm7213-201ENSMUST00000215977 950 ntBASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-7A0A075B6B0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm14859-201ENSMUST00000117752 357 ntBASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Mir1668-201ENSMUST00000184114 107 ntBASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-7A0A075B6B0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-7A0A075B6B0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms