Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Gm8493-201ENSMUST00000196881 489 ntBASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Gm43173-201ENSMUST00000202246 593 ntBASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-4A0A075B654 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Gm38285-201ENSMUST00000192928 922 ntBASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-4A0A075B654 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms