Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13-2A0A075B649 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Gm9731-201ENSMUST00000209480 747 ntBASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13-2A0A075B649 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13-2A0A075B649 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms