Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-3A0A075B648 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12-3A0A075B648 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Gm11643-201ENSMUST00000119578 864 ntBASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Gm12922-201ENSMUST00000120626 809 ntBASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Gm15820-201ENSMUST00000201566 728 ntBASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms