Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Asic1-205ENSMUST00000228185 1818 ntBASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Gm18671-201ENSMUST00000214826 683 ntBASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav8-1A0A075B641 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav8-1A0A075B641 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav8-1A0A075B641 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms