Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm27000-201ENSMUST00000182943 842 ntBASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.83□□□□□ -0.51
Trav16d-dv11A0A075B617 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav16d-dv11A0A075B617 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 App-207ENSMUST00000227737 2827 ntBASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm4968-201ENSMUST00000071458 858 ntBASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16d-dv11A0A075B617 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 AV356131-201ENSMUST00000206201 750 ntBASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16d-dv11A0A075B617 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
Trav16d-dv11A0A075B617 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms