Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Nespas-201ENSMUST00000143738 1083 ntBASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Gm6420-201ENSMUST00000193885 723 ntBASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Gm13234-201ENSMUST00000120010 747 ntBASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav4n-4A0A075B615 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 BC037039-201ENSMUST00000192003 2205 ntBASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav4n-4A0A075B615 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms