Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Gm10698-201ENSMUST00000182663 604 ntBASIC12□□□□□ -0.49
Trav6-6A0A075B603 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12□□□□□ -0.49
Trav6-6A0A075B603 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-6A0A075B603 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-6A0A075B603 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Gm12085-201ENSMUST00000119263 940 ntBASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Gm38027-201ENSMUST00000192315 235 ntBASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-6A0A075B603 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-6A0A075B603 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-6A0A075B603 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6-6A0A075B603 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms