Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 App-207ENSMUST00000227737 2827 ntBASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9-1A0A075B601 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Gm26039-201ENSMUST00000158152 144 ntBASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Gm43799-201ENSMUST00000201845 579 ntBASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9-1A0A075B601 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Gm29707-201ENSMUST00000196325 491 ntBASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Gm18959-201ENSMUST00000208954 655 ntBASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9-1A0A075B601 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms