Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv4A0A075B5I2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv4A0A075B5I2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.08■□□□□ 0.17
Trbv4A0A075B5I2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Prob1-201ENSMUST00000097619 3021 ntBASIC16.08■□□□□ 0.16
Trbv4A0A075B5I2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv4A0A075B5I2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms