Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-424P-201ENST00000384367 105 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 RNU6-763P-201ENST00000390865 106 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 SNORA26.5-201ENST00000391215 123 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 MTCO2P33-201ENST00000402100 465 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 HMGN1P7-201ENST00000491722 313 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 RNA5SP168-201ENST00000516642 112 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 AC015688.6-201ENST00000577737 104 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR2681-201ENST00000581814 105 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.16□□□□□ -2.06
COL4A3BPQ9Y5P4 MIR126-201ENST00000362291 85 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-144P-201ENST00000383951 107 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 SNORA36B-201ENST00000410438 131 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-437P-201ENST00000459408 95 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR4422-201ENST00000581938 83 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 AL591926.4-201ENST00000616895 298 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 U8.5-201ENST00000364528 136 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.288-201ENST00000364854 92 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-338P-201ENST00000383888 105 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.518-201ENST00000384552 113 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR764-201ENST00000390811 85 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 CALM2P4-201ENST00000430810 426 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 snoU13.23-201ENST00000458863 104 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 CYCTP-201ENST00000504253 315 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 JPX_2.1-201ENST00000614161 69 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 U2.14-201ENST00000615943 113 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 WWP1P1-201ENST00000466609 2769 ntBASIC2.14□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.217-201ENST00000364214 105 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-662P-201ENST00000384253 104 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR583-201ENST00000384846 75 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MT-TW-201ENST00000387382 68 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 U8.16-201ENST00000391279 133 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 BTF3P11-201ENST00000426582 477 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MTND3P2-201ENST00000438452 342 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 Z98949.2-201ENST00000440996 144 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.641-201ENST00000459414 105 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 AC110588.1-201ENST00000559699 137 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR4762-201ENST00000585261 75 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 AC005357.1-201ENST00000588399 301 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR6845-201ENST00000613182 61 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 AC013791.1-201ENST00000616619 62 ntBASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A3BPQ9Y5P4 AC134026.1-201ENST00000623249 2239 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-674P-201ENST00000363831 107 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 AC079140.2-201ENST00000506193 142 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU7-12P-201ENST00000516030 62 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR4524B-201ENST00000581569 115 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 AC120024.3-201ENST00000603167 156 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 AC027279.3-201ENST00000625055 122 ntBASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A3BPQ9Y5P4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-472P-201ENST00000384299 107 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-163P-201ENST00000384396 106 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-1065P-201ENST00000384513 106 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-131P-201ENST00000391144 107 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 SNRPGP10-201ENST00000432323 225 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 SUMO2P16-201ENST00000519475 264 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 AC087685.1-201ENST00000587507 141 ntBASIC2.11□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR302D-201ENST00000362275 68 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR891A-201ENST00000401237 79 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 MLLT10P1-201ENST00000418346 262 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 AC245517.4-201ENST00000448601 281 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 MIR5692C2-201ENST00000577959 77 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 AL162730.1-201ENST00000605734 292 ntBASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A3BPQ9Y5P4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms