Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNA5SP467-201ENST00000391274 118 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 SNORD58.1-201ENST00000391313 66 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 MIR1298-201ENST00000408783 112 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 RNU6-651P-201ENST00000411040 105 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 RNU7-116P-201ENST00000516940 62 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 AC009779.6-201ENST00000603972 165 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 AC073413.2-201ENST00000604332 360 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 AC004832.4-201ENST00000608952 331 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 AC134026.1-201ENST00000623249 2239 ntBASIC1.93□□□□□ -2.1
RAI2Q9Y5P3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 MIR597-201ENST00000384968 97 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 SNORA26.5-201ENST00000391215 123 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 HMGN2P39-201ENST00000398005 273 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 AL135790.2-201ENST00000437701 267 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 SNORD116-28-201ENST00000516123 91 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 RNU7-99P-201ENST00000516271 62 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 MIR5692C2-201ENST00000577959 77 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 MIR4282-201ENST00000583613 67 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 MIR6840-201ENST00000611937 71 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 MIR548AY-201ENST00000617669 107 ntBASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAI2Q9Y5P3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 RNA5SP511-201ENST00000410487 115 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AL162725.1-201ENST00000435405 301 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AC104332.1-201ENST00000440471 797 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 SNORD2.1-201ENST00000458762 69 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 U8.19-201ENST00000459095 133 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 RNU7-141P-201ENST00000459304 62 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 COX6CP14-201ENST00000469580 174 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AC117454.1-201ENST00000491120 168 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 MIR4452-201ENST00000583004 71 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 POLR3GP1-201ENST00000594073 261 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AC069114.2-201ENST00000604699 304 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AL008718.3-201ENST00000610217 321 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AC013791.1-201ENST00000616619 62 ntBASIC1.91□□□□□ -2.1
RAI2Q9Y5P3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.9□□□□□ -2.1
RAI2Q9Y5P3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
RAI2Q9Y5P3 RNU6-200P-201ENST00000364743 107 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 MIR520G-201ENST00000385064 90 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 RNU2-14P-201ENST00000411053 191 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 MTND5P15-201ENST00000434246 349 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 RNU7-94P-201ENST00000459576 63 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 RPL23AP54-201ENST00000495129 419 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 AC130289.1-201ENST00000577321 73 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 MIR3683-201ENST00000580847 82 ntBASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RAI2Q9Y5P3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 U8.7-201ENST00000364940 136 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 RNU6-117P-201ENST00000365415 107 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 MIR562-201ENST00000384894 95 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 RNU6-138P-201ENST00000515952 107 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 RNU7-115P-201ENST00000516433 55 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC024405.2-202ENST00000532731 184 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC015720.1-201ENST00000565251 277 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 MIR5094-201ENST00000578766 85 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC078899.2-201ENST00000595282 212 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAI2Q9Y5P3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 MIR367-201ENST00000362299 68 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 RNY4P28-201ENST00000365281 93 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 RNU6-144P-201ENST00000383951 107 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 SNORA36B-201ENST00000410438 131 ntBASIC1.88□□□□□ -2.11
RAI2Q9Y5P3 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms