Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC073413.2-201ENST00000604332 360 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RNA5SP99-201ENST00000364020 114 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA72-201ENST00000384339 132 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 MIR597-201ENST00000384968 97 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 MT-TT-201ENST00000387460 66 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA36B-201ENST00000410438 131 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-383P-201ENST00000410864 94 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC069257.2-201ENST00000441819 155 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RPS26P45-201ENST00000471748 340 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RNU7-128P-201ENST00000517247 62 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC069114.2-201ENST00000604699 304 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 U6.108-201ENST00000637764 58 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 AC018630.2-201ENST00000534866 2403 ntBASIC2.33□□□□□ -2.04
PCDHB1Q9Y5F3 RNY1P5-201ENST00000383890 115 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-969P-201ENST00000383900 105 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 MIR626-201ENST00000385032 94 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC245047.8-201ENST00000456455 284 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 RNA5SP272-201ENST00000516095 111 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA31.25-201ENST00000517242 134 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC127455.1-201ENST00000565496 145 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB1Q9Y5F3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 SNORD114-1-201ENST00000362705 72 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 MIR526A2-201ENST00000390198 65 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 AL606753.1-201ENST00000427435 87 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 RPL23AP54-201ENST00000495129 419 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 AC108706.1-201ENST00000611053 297 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 MIR6079-201ENST00000635807 62 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-674P-201ENST00000363831 107 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA8.3-201ENST00000384679 139 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA48.1-201ENST00000390879 135 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-561P-201ENST00000516222 102 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-341P-201ENST00000516973 96 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 AL358944.1-201ENST00000528537 144 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 MIR4724-201ENST00000579485 89 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHB1Q9Y5F3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RNU4-84P-201ENST00000364200 139 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-275P-201ENST00000364910 107 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-482P-201ENST00000391068 107 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AL603825.1-201ENST00000438481 80 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 SNORD116-25-201ENST00000516517 92 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RNA5SP402-201ENST00000517148 110 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AC084364.2-201ENST00000546924 395 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 MIR5094-201ENST00000578766 85 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 MIR3658-201ENST00000636291 56 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AC132825.6-201ENST00000638861 357 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 AC100821.1-201ENST00000523153 2479 ntBASIC2.29□□□□□ -2.04
PCDHB1Q9Y5F3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 MIR367-201ENST00000362299 68 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-704P-201ENST00000364162 103 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-578P-201ENST00000390980 103 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-131P-201ENST00000391144 107 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 RNU6-437P-201ENST00000459408 95 ntBASIC2.28□□□□□ -2.04
PCDHB1Q9Y5F3 MIR4744-201ENST00000581563 82 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms