Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.570-201ENST00000384750 101 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 HSPE1P21-201ENST00000438283 308 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RPS26P55-201ENST00000471178 356 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RPL30P7-201ENST00000479312 323 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC025465.3-201ENST00000510570 311 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU2-12P-201ENST00000517216 168 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC023157.2-201ENST00000540596 141 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AL442663.2-201ENST00000554385 511 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 MIR4795-201ENST00000584182 89 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AL133255.1-201ENST00000606374 441 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 U6.73-201ENST00000619194 103 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.8□□□□□ -2.28
SHANK1Q9Y566 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SHANK1Q9Y566 MIR302D-201ENST00000362275 68 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 SNORA1B-201ENST00000362535 133 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.31-201ENST00000362574 102 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 RNY3P11-201ENST00000364153 102 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.445-201ENST00000384168 102 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 SNORA72-201ENST00000384339 132 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 RNA5SP323-201ENST00000391094 133 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 MTND4LP11-201ENST00000422184 280 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC005042.3-201ENST00000453230 174 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC093027.1-201ENST00000546698 429 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AL929325.1-201ENST00000603096 117 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC021506.2-201ENST00000612354 169 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC084781.2-201ENST00000615568 161 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.143-201ENST00000363520 106 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.383-201ENST00000383855 97 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.551-201ENST00000384661 102 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 RNU6-1031P-201ENST00000384773 107 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 MIR660-201ENST00000385235 97 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC022493.2-201ENST00000506122 481 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 RNU6-120P-201ENST00000516077 103 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 RNU6-107P-201ENST00000516643 102 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.702-201ENST00000516843 96 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AC007742.2-201ENST00000618226 398 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 AL121890.5-201ENST00000620848 304 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.5-201ENST00000362334 102 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.78□□□□□ -2.28
SHANK1Q9Y566 SNORA22B-201ENST00000383876 138 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.456-201ENST00000384232 111 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 MIR559-201ENST00000385188 96 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
SHANK1Q9Y566 CHEK2P4-201ENST00000450340 246 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 MTND4LP30-201ENST00000454092 297 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 RN7SKP295-201ENST00000517264 153 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AC113195.1-201ENST00000579952 141 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 SNORA28-201ENST00000606769 126 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 GHRLOS.1-201ENST00000610995 70 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AC004467.1-201ENST00000615678 330 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 AC127459.3-201ENST00000624328 466 ntBASIC0.78□□□□□ -2.28
SHANK1Q9Y566 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU6-1123P-201ENST00000362347 106 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.44-201ENST00000362676 108 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 VTRNA1-3-201ENST00000365645 89 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU4-30P-201ENST00000410245 143 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.77□□□□□ -2.29
SHANK1Q9Y566 HSPE1P9-201ENST00000440046 311 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 MTND4P19-201ENST00000446659 478 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 AP000870.1-201ENST00000472927 406 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU6-976P-201ENST00000516086 111 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.77□□□□□ -2.29
SHANK1Q9Y566 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.77□□□□□ -2.29
SHANK1Q9Y566 MIR424-201ENST00000362227 98 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU6-1266P-201ENST00000362794 105 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU4-50P-201ENST00000364361 141 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.535-201ENST00000384612 99 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU2-61P-201ENST00000411069 191 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 AL162725.1-201ENST00000435405 301 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 U8.19-201ENST00000459095 133 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 RNU6-165P-201ENST00000517170 99 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 SNORA77B-201ENST00000578179 125 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 MIR4659A-201ENST00000580269 81 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 MIR4762-201ENST00000585261 75 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 POLR3GP1-201ENST00000594073 261 ntBASIC0.77□□□□□ -2.29
SHANK1Q9Y566 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SHANK1Q9Y566 MIR369-201ENST00000362155 70 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.61-201ENST00000362835 102 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.267-201ENST00000364679 109 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.541-201ENST00000384640 113 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 SNORA53-201ENST00000391141 249 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 RNU6-1337P-201ENST00000516525 95 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 RNU6-341P-201ENST00000516973 96 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 RNU7-128P-201ENST00000517247 62 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 AL512310.8-201ENST00000550183 120 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.76□□□□□ -2.29
SHANK1Q9Y566 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 AC027279.3-201ENST00000625055 122 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.138-201ENST00000363462 102 ntBASIC0.76□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.356-201ENST00000365475 113 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms