Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC025627.3-201ENST00000582078 182 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 SNORD50B-201ENST00000364995 70 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 snoU2-30.1-201ENST00000365012 70 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 Y_RNA.577-201ENST00000384794 101 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
LRRC42Q9Y546 RNU4-14P-201ENST00000410858 122 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 HMGN2P32-201ENST00000444648 269 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 AL392103.1-201ENST00000447000 198 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.43□□□□□ -2.34
LRRC42Q9Y546 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
LRRC42Q9Y546 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-1084P-201ENST00000362498 107 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-654P-201ENST00000364373 107 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 SNORA72-201ENST00000384339 132 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNY3P4-201ENST00000384428 101 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 MIR625-201ENST00000385047 85 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-131P-201ENST00000391144 107 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-1304P-201ENST00000411374 106 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.42□□□□□ -2.34
LRRC42Q9Y546 MTND4P17-201ENST00000470444 350 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-436P-201ENST00000516171 114 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-155P-201ENST00000516347 100 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-358P-201ENST00000516564 75 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU7-30P-201ENST00000516835 62 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU11-2P-201ENST00000516898 142 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 AC011712.1-201ENST00000588959 234 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 AC005176.2-201ENST00000596933 147 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 AC005972.2-201ENST00000604690 348 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 AC084782.3-201ENST00000612282 578 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 AC093783.1-201ENST00000612976 329 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 MIR6504-201ENST00000613520 61 ntBASIC0.42□□□□□ -2.34
LRRC42Q9Y546 RNU6-324P-201ENST00000363957 106 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 RNU6-20P-201ENST00000384106 107 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 Y_RNA.446-201ENST00000384178 104 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 SNORA75.6-201ENST00000391318 127 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 SNORD111-201ENST00000408139 94 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 MIR1276-201ENST00000408707 83 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 RNU6-1156P-201ENST00000410365 100 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 SNRPGP10-201ENST00000432323 225 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 MTND1P4-201ENST00000435196 415 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.41□□□□□ -2.34
LRRC42Q9Y546 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.41□□□□□ -2.34
LRRC42Q9Y546 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
LRRC42Q9Y546 AC008133.2-201ENST00000624540 351 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.41□□□□□ -2.34
LRRC42Q9Y546 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 AC027514.1-201ENST00000588561 1603 ntBASIC0.41□□□□□ -2.34
LRRC42Q9Y546 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.6-201ENST00000362350 114 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.146-201ENST00000363549 102 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RNU6-945P-201ENST00000383947 107 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 SNORD28B-201ENST00000390993 75 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 SNORD78.2-201ENST00000391076 69 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.4□□□□□ -2.35
LRRC42Q9Y546 MIR1827-201ENST00000408549 66 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RNU6-994P-201ENST00000410507 111 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.646-201ENST00000410980 101 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.4□□□□□ -2.35
LRRC42Q9Y546 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.4□□□□□ -2.35
LRRC42Q9Y546 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 U8.19-201ENST00000459095 133 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.691-201ENST00000516611 103 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RBM11P1-201ENST00000604951 799 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 MIR4251-201ENST00000635819 61 ntBASIC0.4□□□□□ -2.35
LRRC42Q9Y546 RNU6-626P-201ENST00000363354 107 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 RNY3P11-201ENST00000364153 102 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 SNORD113.3-201ENST00000364630 78 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.368-201ENST00000365547 113 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 RNU6-310P-201ENST00000384655 107 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 RNU6-1067P-201ENST00000384752 107 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 RNU1-119P-201ENST00000391122 165 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.599-201ENST00000410489 109 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 AL136317.1-201ENST00000612653 226 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 AC011476.5-201ENST00000615594 130 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 AC098679.4-201ENST00000624241 654 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 AC073869.6-201ENST00000640656 341 ntBASIC0.39□□□□□ -2.35
LRRC42Q9Y546 RNU6-1188P-201ENST00000363795 107 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU6-767P-201ENST00000384132 107 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU6-192P-201ENST00000391253 100 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNA5SP95-201ENST00000410319 137 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU6-613P-201ENST00000410412 108 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU6-370P-201ENST00000411008 104 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 Y_RNA.635-201ENST00000459041 101 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 RNU7-4P-201ENST00000516961 62 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 AC093027.1-201ENST00000546698 429 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 MIR548AR-201ENST00000582191 57 ntBASIC0.38□□□□□ -2.35
LRRC42Q9Y546 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms