Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 SNORD115-28-201ENST00000363931 81 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 RNU4-16P-201ENST00000364737 141 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 RNU1-133P-201ENST00000364867 167 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 SNORA25B-201ENST00000365507 128 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 RN7SKP220-201ENST00000410611 288 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 FTH1P12-201ENST00000432137 551 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AC009238.1-201ENST00000442165 424 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AC009237.6-201ENST00000446969 424 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 RNU1-131P-201ENST00000458943 161 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AL049830.1-201ENST00000468034 425 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 HSPE1P19-201ENST00000603327 295 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 AC019176.2-201ENST00000611579 315 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HIF3AQ9Y2N7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 MIR208A-201ENST00000362287 71 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 SNORD56.3-201ENST00000363507 71 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 SNORD14E-201ENST00000364009 85 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 RNA5SP293-201ENST00000410527 113 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 RPL23AP83-201ENST00000434984 473 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 RN7SL636P-201ENST00000497504 294 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 MIR2052-201ENST00000636055 55 ntBASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIF3AQ9Y2N7 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNA5SP119-201ENST00000362715 117 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-525P-201ENST00000363685 104 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-461P-201ENST00000364195 107 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-442P-201ENST00000383968 104 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 SNORA8-201ENST00000384574 139 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 MIR515-2-201ENST00000384883 83 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 MIR515-1-201ENST00000384884 83 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 SNX2P2-201ENST00000424553 323 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 AL445646.1-201ENST00000431784 216 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 Z96811.1-201ENST00000445880 108 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 TRBV12-1-201ENST00000479785 344 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 SNORA18.7-201ENST00000516910 131 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-158P-201ENST00000517104 100 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 AC026421.1-201ENST00000519101 163 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 MIR3163-201ENST00000581592 73 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 AC002984.1-201ENST00000591692 448 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 AL590808.1-201ENST00000618696 141 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HIF3AQ9Y2N7 MIR302B-201ENST00000362188 73 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 MIR342-201ENST00000362212 99 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNY1P10-201ENST00000363268 113 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-268P-201ENST00000364174 107 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 SNORD114-6-201ENST00000364393 72 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 MIR627-201ENST00000384979 97 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RPS29P4-201ENST00000414733 161 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNU7-94P-201ENST00000459576 63 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AC091826.1-201ENST00000514065 313 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNA5SP217-201ENST00000515959 91 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 RNU7-6P-201ENST00000516845 62 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 MIR4276-201ENST00000584832 70 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 MIR3922-201ENST00000585192 84 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AL449363.1-201ENST00000617815 186 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AC015726.2-201ENST00000620112 122 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 AL162726.3-218ENST00000636401 95 ntBASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
HIF3AQ9Y2N7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNY3P2-201ENST00000362918 102 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-160P-201ENST00000384591 107 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-816P-201ENST00000390914 107 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-1268P-201ENST00000391214 107 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNU6-1239P-201ENST00000391310 107 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNA5SP57-201ENST00000459463 123 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 RNU2-35P-201ENST00000516446 142 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AC024995.1-201ENST00000523014 93 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AP002004.2-201ENST00000531656 154 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 MIR4305-201ENST00000583252 102 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AL513534.2-201ENST00000603836 250 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 U3.45-201ENST00000607547 219 ntBASIC2.93□□□□□ -1.94
HIF3AQ9Y2N7 AC006441.5-201ENST00000612680 209 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 439.7 ms