Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SSX2IPQ9Y2D8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU1-58P-201ENST00000362413 163 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU4-17P-201ENST00000365598 141 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.435-201ENST00000384095 112 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-209P-201ENST00000384118 107 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.555-201ENST00000384673 110 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-918P-201ENST00000391219 106 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-493P-201ENST00000391321 108 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 SNORA36B-201ENST00000410438 131 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 CST2P1-201ENST00000425770 87 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-295P-201ENST00000516901 104 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 AC127455.1-201ENST00000565496 145 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SSX2IPQ9Y2D8 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-47P-201ENST00000383866 107 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 SNORA72-201ENST00000384339 132 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 MIR626-201ENST00000385032 94 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 MIR526A2-201ENST00000390198 65 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 AL117342.1-201ENST00000404861 406 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 COX6CP10-201ENST00000416832 224 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 AC107393.1-201ENST00000512403 346 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP182-201ENST00000516064 82 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 MIR4724-201ENST00000579485 89 ntBASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SSX2IPQ9Y2D8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.7-201ENST00000362352 102 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 Y_RNA.233-201ENST00000364407 101 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 RNU6-136P-201ENST00000384663 107 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 RNA5SP467-201ENST00000391274 118 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 RPL23AP54-201ENST00000495129 419 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 AC024995.1-201ENST00000523014 93 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 MIR4308-201ENST00000580634 81 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 AC005786.1-201ENST00000588553 154 ntBASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
SSX2IPQ9Y2D8 MIR367-201ENST00000362299 68 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.121-201ENST00000363309 113 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 MIR520G-201ENST00000385064 90 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 U8.13-201ENST00000390842 128 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 RNA5SP323-201ENST00000391094 133 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 AC078899.2-201ENST00000595282 212 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 AC073413.2-201ENST00000604332 360 ntBASIC2.21□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.24-201ENST00000362508 103 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-862P-201ENST00000362804 105 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-886P-201ENST00000384319 105 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU4-70P-201ENST00000384579 139 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.571-201ENST00000384753 98 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 MIR583-201ENST00000384846 75 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-437P-201ENST00000459408 95 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RN7SKP164-201ENST00000516138 266 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 SNORA31.25-201ENST00000517242 134 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 RNU7-128P-201ENST00000517247 62 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 AC068700.1-201ENST00000565862 3754 ntBASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SSX2IPQ9Y2D8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.150-201ENST00000363562 102 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-103P-201ENST00000363686 107 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-674P-201ENST00000363831 107 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.180-201ENST00000363867 113 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 MIR562-201ENST00000384894 95 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 RPS4XP11-201ENST00000446897 772 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 HMGN2P23-201ENST00000456759 269 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.662-201ENST00000516028 97 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-861P-201ENST00000516745 106 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 AL096840.1-201ENST00000603287 93 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 U6.106-201ENST00000636360 105 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-682P-201ENST00000363843 106 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNU4-10P-201ENST00000364383 140 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-969P-201ENST00000383900 105 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNA5SP465-201ENST00000391195 109 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-381P-201ENST00000391259 108 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 AC022559.1-201ENST00000520905 205 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 AC011604.1-201ENST00000545978 196 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 MIR4529-201ENST00000578110 78 ntBASIC2.18□□□□□ -2.06
SSX2IPQ9Y2D8 AC018630.2-201ENST00000534866 2403 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms