Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MTCO2P27-201ENST00000420740 428 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC114811.1-201ENST00000507207 168 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 RNU6-436P-201ENST00000516171 114 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 SNORD111.1-201ENST00000516421 86 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.718-201ENST00000517110 102 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC005730.3-201ENST00000583067 366 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 MIR4762-201ENST00000585261 75 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AL078603.1-201ENST00000603824 313 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC005972.2-201ENST00000604690 348 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC022441.3-201ENST00000605737 136 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 U6.92-201ENST00000636464 89 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.336-201ENST00000365307 109 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 SNORD116-29-201ENST00000384516 83 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 RNU6-710P-201ENST00000410424 105 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AC096644.2-201ENST00000429278 159 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AC093019.1-201ENST00000443135 252 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 SNORD116.3-201ENST00000517176 78 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 RN7SKP295-201ENST00000517264 153 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AC006600.1-201ENST00000572529 153 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AL132765.2-201ENST00000610812 351 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 RMST_2.1-201ENST00000617263 136 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.146-201ENST00000363549 102 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.187-201ENST00000363918 113 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1283P-201ENST00000365314 105 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 RNU6-708P-201ENST00000384217 107 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 AC084781.2-201ENST00000615568 161 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 AL008636.1-201ENST00000625038 1018 ntBASIC0.77□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1084P-201ENST00000362498 107 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.70-201ENST00000362886 110 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 SNORA72.1-201ENST00000363485 129 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1175P-201ENST00000365200 107 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.463-201ENST00000384271 102 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 SNORA72-201ENST00000384339 132 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 MIR1298-201ENST00000408783 112 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AL390729.2-201ENST00000416137 156 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 MCFD2P1-201ENST00000417812 300 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 RPS20P10-201ENST00000451209 253 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AC005042.3-201ENST00000453230 174 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AC245047.8-201ENST00000456455 284 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 SNORA25.10-201ENST00000515926 124 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 RNA5SP220-201ENST00000516298 104 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.714-201ENST00000517065 90 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 RBM11P1-201ENST00000604951 799 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AL096861.1-201ENST00000610899 123 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 AL138825.1-201ENST00000618587 192 ntBASIC0.76□□□□□ -2.29
CLCF1Q9UBD9 SNORD114-24-201ENST00000365029 72 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.329-201ENST00000365209 107 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.570-201ENST00000384750 101 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MIR200A-201ENST00000384875 90 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MIR15B-201ENST00000385045 98 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MIR522-201ENST00000385071 87 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MIR136-201ENST00000385207 82 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MLLT10P1-201ENST00000418346 262 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 RNU7-152P-201ENST00000458982 64 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 FGF7P4-201ENST00000509595 295 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 RNU6-966P-201ENST00000516479 104 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AL355375.2-201ENST00000574825 175 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 PRELID3BP2-201ENST00000605362 201 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.772-201ENST00000606692 102 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AL391903.3-201ENST00000612158 163 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AC010205.1-201ENST00000616668 449 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 MIR4272-201ENST00000635924 64 ntBASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
CLCF1Q9UBD9 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.39-201ENST00000362620 98 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 snoU2-30.1-201ENST00000365012 70 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AC117470.1-201ENST00000381974 330 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.462-201ENST00000384268 102 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RNU6-131P-201ENST00000391144 107 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RNU6-855P-201ENST00000410395 104 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AC024067.1-201ENST00000426199 223 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AC236972.2-201ENST00000434979 310 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms