Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AL590004.2-201ENST00000404787 371 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RPS27P22-201ENST00000478056 241 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP236-201ENST00000516169 116 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 MIR4524B-201ENST00000581569 115 ntBASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.13□□□□□ -1.91
LMCD1Q9NZU5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.49-201ENST00000362714 112 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 SNORA63.5-201ENST00000363548 123 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 RNU6-944P-201ENST00000364023 107 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.203-201ENST00000364106 102 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 SNORA14A-201ENST00000364773 135 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 SNORA9.2-201ENST00000365361 133 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 AC023449.1-201ENST00000454464 154 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 snoU13.26-201ENST00000459452 105 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 AC139453.2-201ENST00000487255 133 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP153-201ENST00000516498 76 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 RNU6-365P-201ENST00000517113 106 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 MIR4765-201ENST00000585007 77 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LMCD1Q9NZU5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP136-201ENST00000410906 107 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 PGBD4P5-201ENST00000445958 426 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 COX6CP6-201ENST00000490840 228 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 SNORA18.4-201ENST00000516440 124 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 AC109329.2-201ENST00000519658 482 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 MIR4769-201ENST00000584126 77 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 Pinc.1-201ENST00000616452 154 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
LMCD1Q9NZU5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.17-201ENST00000362433 111 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.107-201ENST00000363190 121 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 RNU6-234P-201ENST00000365229 104 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 RNU6-787P-201ENST00000384032 107 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 MIR624-201ENST00000385217 97 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 AC107297.1-201ENST00000459991 176 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 SNORD77.4-201ENST00000516158 81 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 RNU6-904P-201ENST00000516206 101 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 RNU6-948P-201ENST00000516374 107 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 MIR3117-201ENST00000584034 78 ntBASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.1□□□□□ -1.91
LMCD1Q9NZU5 AL589743.1-201ENST00000551932 2712 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 RNU6-859P-201ENST00000362728 107 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 Y_RNA.78-201ENST00000362970 110 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 RNU6-1209P-201ENST00000363655 107 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 RNU6-117P-201ENST00000365415 107 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 RNU6-279P-201ENST00000391297 101 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 AC022137.1-201ENST00000483735 151 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 MRPS36P2-201ENST00000512569 299 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 RNA5SP24-201ENST00000516478 95 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 AC105245.1-201ENST00000581934 244 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 AC064859.1-201ENST00000624741 174 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 MIR2052-201ENST00000636055 55 ntBASIC3.09□□□□□ -1.91
LMCD1Q9NZU5 GABRG2-229ENST00000641017 3628 ntBASIC3.09□□□□□ -1.92
LMCD1Q9NZU5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
LMCD1Q9NZU5 RNU6-1125P-201ENST00000363601 107 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 SNORD31B-201ENST00000364977 69 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 SNORA67.4-201ENST00000384688 142 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 RNA5SP127-201ENST00000411051 133 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 AF228730.3-201ENST00000436691 102 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 RPS4XP11-201ENST00000446897 772 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 RNU6-893P-201ENST00000458841 100 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 RNU7-149P-201ENST00000516739 59 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 MIR2681-201ENST00000581814 105 ntBASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LMCD1Q9NZU5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 Y_RNA.796-201ENST00000364268 102 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 Y_RNA.799-201ENST00000364992 102 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 Y_RNA.362-201ENST00000365518 110 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 RNU6-438P-201ENST00000365561 103 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 Y_RNA.486-201ENST00000384398 107 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 AC016909.1-201ENST00000415916 166 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 RPL30P4-201ENST00000429309 333 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 AC245102.2-201ENST00000448956 180 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 snoU13.15-201ENST00000459407 104 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
LMCD1Q9NZU5 RNU6-965P-201ENST00000516721 96 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms