Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RNU6-969P-201ENST00000383900 105 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.474-201ENST00000384341 102 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.505-201ENST00000384489 102 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6-310P-201ENST00000384655 107 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 MT-TL1-201ENST00000386347 75 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU2-61P-201ENST00000411069 191 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1199P-201ENST00000411249 104 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 FCF1P4-201ENST00000448326 183 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1012P-201ENST00000516606 109 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 RNU6-264P-201ENST00000517134 104 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 MTND4LP26-201ENST00000518144 282 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 AC144568.1-201ENST00000520139 137 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 U6atac.1-201ENST00000616025 117 ntBASIC0.79□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.160-201ENST00000363677 92 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.230-201ENST00000364348 109 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 SNORD81.2-201ENST00000365153 76 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 RNY1P4-201ENST00000384595 115 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 MIR452-201ENST00000385020 85 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AL031003.1-201ENST00000404229 172 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 RNU6-733P-201ENST00000410759 104 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 RPL23AP50-201ENST00000434149 455 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC233266.1-201ENST00000454518 96 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 RNU6-63P-201ENST00000516690 95 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1213P-201ENST00000517075 94 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC242852.1-201ENST00000612151 96 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC244015.1-201ENST00000622301 99 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 AC138305.3-201ENST00000624988 240 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 TPTEP1-208ENST00000636884 213 ntBASIC0.78□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.101-201ENST00000363154 102 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.248-201ENST00000364501 109 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AC104332.1-201ENST00000440471 797 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AC093019.1-201ENST00000443135 252 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AC117454.1-201ENST00000491120 168 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 RNU6-470P-201ENST00000515954 104 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 RNU6-1116P-201ENST00000517269 99 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AC006380.1-201ENST00000603598 186 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AL591926.4-201ENST00000616895 298 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 AL008636.1-201ENST00000625038 1018 ntBASIC0.77□□□□□ -2.29
HOXC10Q9NYD6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 SNORD78.2-201ENST00000391076 69 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 RNU6-370P-201ENST00000411008 104 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 MRPS18CP6-201ENST00000423587 223 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 MTND1P2-201ENST00000430604 821 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 SNORA25.10-201ENST00000515926 124 ntBASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
HOXC10Q9NYD6 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU6-890P-201ENST00000384121 107 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU6-136P-201ENST00000384663 107 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 MIR522-201ENST00000385071 87 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.599-201ENST00000410489 109 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU7-90P-201ENST00000459216 62 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 AC114811.1-201ENST00000507207 168 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU6-436P-201ENST00000516171 114 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU6-947P-201ENST00000516264 106 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 SNORD111.1-201ENST00000516421 86 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 SNORA74.3-201ENST00000517108 154 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 MIR3192-201ENST00000584920 77 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 AL512605.2-201ENST00000592972 256 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 AC022441.3-201ENST00000605737 136 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.75□□□□□ -2.29
HOXC10Q9NYD6 RNU6-490P-201ENST00000362985 107 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 RNU6-163P-201ENST00000384396 106 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 SNORD116-13-201ENST00000384408 92 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 MIR15B-201ENST00000385045 98 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 SNORA75.2-201ENST00000391138 150 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 SNORA75.3-201ENST00000391231 150 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 MIR1298-201ENST00000408783 112 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 RPS3AP1-201ENST00000413190 320 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 AC099799.1-201ENST00000439809 192 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 MTND4P17-201ENST00000470444 350 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 RNU6-120P-201ENST00000516077 103 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 MIR4423-201ENST00000580922 80 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 AC005176.2-201ENST00000596933 147 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 AC113139.1-201ENST00000605049 239 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.27-201ENST00000362540 103 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 RNA5SP264-201ENST00000363115 107 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 RNU6-626P-201ENST00000363354 107 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 RNU6-20P-201ENST00000384106 107 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 Y_RNA.446-201ENST00000384178 104 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 SNORA72-201ENST00000384339 132 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 CHEK2P4-201ENST00000450340 246 ntBASIC0.73□□□□□ -2.29
HOXC10Q9NYD6 SNORA20.3-201ENST00000516880 132 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms