Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC244015.1-201ENST00000622301 99 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AL391987.6-201ENST00000305671 199 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NDE1Q9NXR1 RNU1-17P-201ENST00000363022 152 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 RNU6-801P-201ENST00000364087 105 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 RNU6-514P-201ENST00000384208 107 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NDE1Q9NXR1 SNORA26.5-201ENST00000391215 123 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AC024067.1-201ENST00000426199 223 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AL162725.1-201ENST00000435405 301 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 SERF1AP1-201ENST00000514575 187 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 MIR4503-201ENST00000582187 83 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AC091178.2-201ENST00000584401 117 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 AL929325.1-201ENST00000603096 117 ntBASIC1.44□□□□□ -2.18
NDE1Q9NXR1 SNORA1B-201ENST00000362535 133 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.144-201ENST00000363521 113 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU6-326P-201ENST00000365480 107 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU6-196P-201ENST00000384315 107 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 U8.13-201ENST00000390842 128 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU6-763P-201ENST00000390865 106 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU6-710P-201ENST00000410424 105 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC069257.2-201ENST00000441819 155 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC117454.1-201ENST00000491120 168 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AL512605.2-201ENST00000592972 256 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC037487.3-201ENST00000606668 112 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 MIR8054-201ENST00000620877 86 ntBASIC1.43□□□□□ -2.18
NDE1Q9NXR1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.43□□□□□ -2.18
NDE1Q9NXR1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
NDE1Q9NXR1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.117-201ENST00000363294 101 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 U8.7-201ENST00000364940 136 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 SNORA12.1-201ENST00000390873 148 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 MTCO2P33-201ENST00000402100 465 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 MIR1302-3-201ENST00000408128 138 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 AC104332.1-201ENST00000440471 797 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 STAG3L5P-204ENST00000443759 179 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 U8.19-201ENST00000459095 133 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 RNU7-141P-201ENST00000459304 62 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
NDE1Q9NXR1 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 AC012433.1-201ENST00000588916 398 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 AC005972.2-201ENST00000604690 348 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 7SK.10-201ENST00000621414 298 ntBASIC1.42□□□□□ -2.18
NDE1Q9NXR1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NDE1Q9NXR1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC068700.1-201ENST00000565862 3754 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.288-201ENST00000364854 92 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 SNORA72.4-201ENST00000384174 132 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 RNU6-440P-201ENST00000390882 105 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 SNORA40.18-201ENST00000391200 128 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 RNU6-651P-201ENST00000411040 105 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 BTF3P11-201ENST00000426582 477 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 snoU13.27-201ENST00000459278 104 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 RNU2-56P-201ENST00000516826 190 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 RNU6-341P-201ENST00000516973 96 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC136628.3-201ENST00000521868 290 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC024405.2-202ENST00000532731 184 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC011604.1-201ENST00000545978 196 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.41□□□□□ -2.18
NDE1Q9NXR1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.41□□□□□ -2.18
NDE1Q9NXR1 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
NDE1Q9NXR1 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR337-201ENST00000362281 93 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.193-201ENST00000363979 102 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 RNU6-740P-201ENST00000364734 105 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 RNU6-338P-201ENST00000383888 105 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR520G-201ENST00000385064 90 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR1287-201ENST00000408492 90 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 COX6CP10-201ENST00000416832 224 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 SNORD127-201ENST00000458892 86 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 RNU7-94P-201ENST00000459576 63 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 SNORA27.4-201ENST00000516650 95 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR4709-201ENST00000577272 72 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR4498-201ENST00000577599 66 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR3149-201ENST00000584629 83 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 POLR3GP1-201ENST00000594073 261 ntBASIC1.4□□□□□ -2.19
NDE1Q9NXR1 U2.14-201ENST00000615943 113 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms