Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CHEK2P4-201ENST00000450340 246 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MTND3P10-201ENST00000450967 341 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC107399.1-201ENST00000451226 265 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 RPL17P19-201ENST00000489069 552 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC105313.1-201ENST00000509121 353 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MIR2115-201ENST00000516657 100 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC012433.1-201ENST00000588916 398 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC005972.2-201ENST00000604690 348 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC091925.1-201ENST00000623204 462 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CLN6Q9NWW5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.148-201ENST00000363557 117 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.172-201ENST00000363765 102 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 SNORD14E-201ENST00000364009 85 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.453-201ENST00000384223 109 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 SNORA72-201ENST00000384339 132 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 RNU6-510P-201ENST00000391239 108 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 MIR1276-201ENST00000408707 83 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AC104695.3-201ENST00000604052 296 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.101-201ENST00000363154 102 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RNU4-24P-201ENST00000364565 139 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORD114-22-201ENST00000365423 72 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.368-201ENST00000365547 113 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORD38C-201ENST00000384381 69 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 MTND4P28-201ENST00000426217 387 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RPS29P1-201ENST00000465274 159 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RPS29P25-201ENST00000481709 171 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 AC240442.1-201ENST00000616055 283 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-99P-201ENST00000364721 107 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.404-201ENST00000383978 102 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.482-201ENST00000384377 111 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 SNORD28B-201ENST00000390993 75 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-177P-201ENST00000411257 104 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
CLN6Q9NWW5 FCF1P4-201ENST00000448326 183 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-155P-201ENST00000516347 100 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 MIR548AR-201ENST00000582191 57 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC005176.2-201ENST00000596933 147 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 RNU6-396P-201ENST00000365369 105 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR802-201ENST00000390235 94 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 SNORA69.1-201ENST00000390904 137 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC093534.1-201ENST00000504977 132 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC011352.1-201ENST00000512300 793 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AL355375.2-201ENST00000574825 175 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC007742.2-201ENST00000618226 398 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR6788-201ENST00000618842 66 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 MIR625-201ENST00000385047 85 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNU6-192P-201ENST00000391253 100 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 U4.5-201ENST00000617137 123 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 MIR3688-2-201ENST00000636963 87 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.86-201ENST00000363020 111 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.376-201ENST00000365638 108 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.446-201ENST00000384178 104 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RNU6-342P-201ENST00000384521 104 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR520H-201ENST00000385126 88 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 SNORD115-47-201ENST00000391226 86 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 SNORA75.4-201ENST00000391278 119 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.592-201ENST00000410274 109 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MTND3P8-201ENST00000412909 339 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR5000-201ENST00000577717 103 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RMST_2.1-201ENST00000617263 136 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.88-201ENST00000363029 99 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-442P-201ENST00000383968 104 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-767P-201ENST00000384132 107 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 SNORA51.10-201ENST00000384418 136 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 MIR548J-201ENST00000408833 112 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-855P-201ENST00000410395 104 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC116353.2-201ENST00000505332 712 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-436P-201ENST00000516171 114 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 MIR151B-201ENST00000584249 96 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC087685.1-201ENST00000587507 141 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms