Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CHEK2P4-201ENST00000450340 246 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MTND3P10-201ENST00000450967 341 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC107399.1-201ENST00000451226 265 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 RPL17P19-201ENST00000489069 552 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC105313.1-201ENST00000509121 353 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MIR2115-201ENST00000516657 100 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC012433.1-201ENST00000588916 398 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC005972.2-201ENST00000604690 348 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 AC091925.1-201ENST00000623204 462 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
CLN6Q9NWW5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CLN6Q9NWW5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.148-201ENST00000363557 117 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.172-201ENST00000363765 102 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 SNORD14E-201ENST00000364009 85 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.453-201ENST00000384223 109 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 SNORA72-201ENST00000384339 132 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 RNU6-510P-201ENST00000391239 108 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 MIR1276-201ENST00000408707 83 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.31□□□□□ -2.36
CLN6Q9NWW5 AC104695.3-201ENST00000604052 296 ntBASIC0.31□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.101-201ENST00000363154 102 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RNU4-24P-201ENST00000364565 139 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORD114-22-201ENST00000365423 72 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.368-201ENST00000365547 113 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORD38C-201ENST00000384381 69 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 MTND4P28-201ENST00000426217 387 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RPS29P1-201ENST00000465274 159 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 RPS29P25-201ENST00000481709 171 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.3□□□□□ -2.36
CLN6Q9NWW5 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 AC240442.1-201ENST00000616055 283 ntBASIC0.3□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-99P-201ENST00000364721 107 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.404-201ENST00000383978 102 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.482-201ENST00000384377 111 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 SNORD28B-201ENST00000390993 75 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-177P-201ENST00000411257 104 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
CLN6Q9NWW5 FCF1P4-201ENST00000448326 183 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 RNU6-155P-201ENST00000516347 100 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 MIR548AR-201ENST00000582191 57 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 AC005176.2-201ENST00000596933 147 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
CLN6Q9NWW5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 RNU6-396P-201ENST00000365369 105 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR802-201ENST00000390235 94 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 SNORA69.1-201ENST00000390904 137 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC093534.1-201ENST00000504977 132 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC011352.1-201ENST00000512300 793 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AL355375.2-201ENST00000574825 175 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC007742.2-201ENST00000618226 398 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 MIR6788-201ENST00000618842 66 ntBASIC0.28□□□□□ -2.36
CLN6Q9NWW5 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 MIR625-201ENST00000385047 85 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNU6-192P-201ENST00000391253 100 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 U4.5-201ENST00000617137 123 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 MIR3688-2-201ENST00000636963 87 ntBASIC0.27□□□□□ -2.37
CLN6Q9NWW5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.86-201ENST00000363020 111 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.376-201ENST00000365638 108 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.446-201ENST00000384178 104 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RNU6-342P-201ENST00000384521 104 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR520H-201ENST00000385126 88 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 SNORD115-47-201ENST00000391226 86 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 SNORA75.4-201ENST00000391278 119 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.592-201ENST00000410274 109 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MTND3P8-201ENST00000412909 339 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 MIR5000-201ENST00000577717 103 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 RMST_2.1-201ENST00000617263 136 ntBASIC0.26□□□□□ -2.37
CLN6Q9NWW5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.26□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.88-201ENST00000363029 99 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-442P-201ENST00000383968 104 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-767P-201ENST00000384132 107 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 SNORA51.10-201ENST00000384418 136 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 MIR548J-201ENST00000408833 112 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-855P-201ENST00000410395 104 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC116353.2-201ENST00000505332 712 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 RNU6-436P-201ENST00000516171 114 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.25□□□□□ -2.37
CLN6Q9NWW5 MIR151B-201ENST00000584249 96 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC087685.1-201ENST00000587507 141 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms