Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 Y_RNA.7-201ENST00000362352 102 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 Y_RNA.24-201ENST00000362508 103 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNU6-103P-201ENST00000363686 107 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNA5SP425-201ENST00000410336 112 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNU4-53P-201ENST00000410828 140 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNU6-383P-201ENST00000410864 94 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AL591806.2-201ENST00000433122 173 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AL049830.1-201ENST00000468034 425 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 RNU7-28P-201ENST00000516759 62 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 MIR4308-201ENST00000580634 81 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AC072026.1-201ENST00000605023 201 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AC067747.1-201ENST00000608026 250 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AL391903.3-201ENST00000612158 163 ntBASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.28□□□□□ -2.04
CCM2LQ9NUG4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 MT-TR-201ENST00000387439 65 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 RNU6-918P-201ENST00000391219 106 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 RN7SKP101-201ENST00000411376 320 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 RNU7-120P-201ENST00000459334 63 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 HMGN1P7-201ENST00000491722 313 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 MIR4648-201ENST00000580107 72 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 SNORA28-201ENST00000606769 126 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 AC098479.1-201ENST00000609225 154 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 MIR8054-201ENST00000620877 86 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.27□□□□□ -2.05
CCM2LQ9NUG4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.229-201ENST00000364347 113 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNU6-47P-201ENST00000383866 107 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNU4-70P-201ENST00000384579 139 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNU6-296P-201ENST00000384608 107 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.571-201ENST00000384753 98 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 MIR616-201ENST00000385293 97 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 MIR764-201ENST00000390811 85 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP482-201ENST00000391269 118 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 MIR1289-2-201ENST00000408360 111 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RN7SKP200-201ENST00000410564 320 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP100-201ENST00000410903 110 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP59-201ENST00000410922 110 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 PIGPP3-201ENST00000425307 415 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 AC023449.1-201ENST00000454464 154 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP437-201ENST00000517249 129 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 AC004792.1-201ENST00000614523 137 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCM2LQ9NUG4 ZNF702P-202ENST00000434269 1966 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 RNU6-440P-201ENST00000390882 105 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 RNU6-482P-201ENST00000391068 107 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP57-201ENST00000459463 123 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 RPL23AP91-201ENST00000569211 455 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 AL021707.8-201ENST00000609428 183 ntBASIC2.25□□□□□ -2.05
CCM2LQ9NUG4 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 snoU2_19.4-201ENST00000364329 80 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.238-201ENST00000364441 102 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 MIR27B-201ENST00000385129 97 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 RNU2-2P-201ENST00000410396 191 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 STAG3L5P-204ENST00000443759 179 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 RNU2-4P-201ENST00000606190 192 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 AL591926.4-201ENST00000616895 298 ntBASIC2.24□□□□□ -2.05
CCM2LQ9NUG4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP276-201ENST00000362580 94 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 RNY3P5-201ENST00000384127 102 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.572-201ENST00000384757 98 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 AL034345.1-201ENST00000407768 123 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 SNRPGP10-201ENST00000432323 225 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 HSPE1P9-201ENST00000440046 311 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms