Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL353997.1-201ENST00000432936 108 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 MTND1P17-201ENST00000448961 204 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.02□□□□□ -2.41
VCX3BQ9H321 U8.19-201ENST00000459095 133 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-864P-201ENST00000516256 108 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-405P-201ENST00000516637 110 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 MIR4264-201ENST00000583520 66 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 MIR3611-201ENST00000584484 83 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 AC018638.8-201ENST00000588755 281 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 AP000753.3-201ENST00000604083 169 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 uc_338.16-201ENST00000621804 95 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 SNORA72-201ENST00000384339 132 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 RNA5SP193-201ENST00000410353 107 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 RNU2-61P-201ENST00000411069 191 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 AL603825.1-201ENST00000438481 80 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 HMGN1P10-201ENST00000474557 553 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.03□□□□□ -2.41
VCX3BQ9H321 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
VCX3BQ9H321 AC005972.2-201ENST00000604690 348 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 uc_338.6-201ENST00000613544 171 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 MTND1P7-201ENST00000632801 297 ntBASIC-0.03□□□□□ -2.41
VCX3BQ9H321 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 SNORA25.9-201ENST00000365087 128 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 SNORA8.2-201ENST00000384372 139 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 SNORD100-201ENST00000408573 76 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 SNORD12B-201ENST00000410433 91 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 SNRPGP14-201ENST00000435400 219 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.04□□□□□ -2.42
VCX3BQ9H321 RNU7-56P-201ENST00000458744 62 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.04□□□□□ -2.42
VCX3BQ9H321 RNU6-830P-201ENST00000516353 107 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 EIF1P4-201ENST00000572664 335 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 AC008608.1-201ENST00000603910 127 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 AC004467.1-201ENST00000615678 330 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 AC090617.10-201ENST00000624308 134 ntBASIC-0.04□□□□□ -2.42
VCX3BQ9H321 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 SNORD116-8-201ENST00000384365 95 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 U8.17-201ENST00000391292 132 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AL139396.1-201ENST00000421137 167 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AC090844.1-201ENST00000422019 156 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 CHEK2P4-201ENST00000450340 246 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AC011352.1-201ENST00000512300 793 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 SNORA4-201ENST00000584302 138 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AC087685.1-201ENST00000587507 141 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 MIR6128-201ENST00000615528 109 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 Pinc.1-201ENST00000616452 154 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 MIR3662-201ENST00000637030 95 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
VCX3BQ9H321 AC027514.1-201ENST00000588561 1603 ntBASIC-0.05□□□□□ -2.42
VCX3BQ9H321 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RNU6-961P-201ENST00000363893 105 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RNU6-442P-201ENST00000383968 104 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
VCX3BQ9H321 MTCO2P33-201ENST00000402100 465 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC091959.1-201ENST00000495857 238 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RNU6-408P-201ENST00000515910 100 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 SNORA18.4-201ENST00000516440 124 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RNU7-181P-201ENST00000517234 74 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC112693.2-201ENST00000556538 232 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RPL23AP91-201ENST00000569211 455 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC090897.1-201ENST00000580909 226 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC006380.1-201ENST00000603598 186 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AL078603.1-201ENST00000603824 313 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 RN7SKP299-201ENST00000606679 301 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 MIR4791-201ENST00000607666 84 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 AC240442.1-201ENST00000616055 283 ntBASIC-0.06□□□□□ -2.42
VCX3BQ9H321 SNORA75.6-201ENST00000391318 127 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 MIR938-201ENST00000401216 83 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCX3BQ9H321 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCX3BQ9H321 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCX3BQ9H321 RNU7-62P-201ENST00000458856 62 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCX3BQ9H321 RNU6-966P-201ENST00000516479 104 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 AC060780.3-201ENST00000589464 80 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 AC018462.2-201ENST00000605375 395 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 MIR8070-201ENST00000616510 88 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 uc_338.4-201ENST00000616635 176 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 AC007742.2-201ENST00000618226 398 ntBASIC-0.07□□□□□ -2.42
VCX3BQ9H321 MIR1321-201ENST00000637766 79 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms