Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SNORD19B-201ENST00000459623 84 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 HMGN1P7-201ENST00000491722 313 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 MIR4423-201ENST00000580922 80 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 RBM11P1-201ENST00000604951 799 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.772-201ENST00000606692 102 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 AL391903.3-201ENST00000612158 163 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 AC104985.2-201ENST00000620598 500 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 AC091925.1-201ENST00000623204 462 ntBASIC0.85□□□□□ -2.27
COMMD4Q9H0A8 RNU6-1115P-201ENST00000362490 106 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.39-201ENST00000362620 98 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.331-201ENST00000365267 102 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.341-201ENST00000365341 102 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.356-201ENST00000365475 113 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 AC117470.1-201ENST00000381974 330 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 RNU6-969P-201ENST00000383900 105 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.496-201ENST00000384444 101 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 Y_RNA.529-201ENST00000384586 119 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 SNORA75.2-201ENST00000391138 150 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 RNU6-131P-201ENST00000391144 107 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 SNORA75.3-201ENST00000391231 150 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 AL390729.2-201ENST00000416137 156 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 SNORA74.3-201ENST00000517108 154 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 MIR5188-201ENST00000583467 113 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 RPS29P30-201ENST00000600975 111 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.84□□□□□ -2.27
COMMD4Q9H0A8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.28
COMMD4Q9H0A8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
COMMD4Q9H0A8 snoU2-30.1-201ENST00000365012 70 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.458-201ENST00000384240 102 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.462-201ENST00000384268 102 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 MIR520C-201ENST00000385005 87 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 RNU6-1009P-201ENST00000390996 107 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 SNRPGP10-201ENST00000432323 225 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AL160004.2-201ENST00000432935 350 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AC236972.2-201ENST00000434979 310 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 RNU7-90P-201ENST00000459216 62 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 RNU4-77P-201ENST00000516692 156 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.714-201ENST00000517065 90 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 snoU13.31-201ENST00000607291 104 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.83□□□□□ -2.28
COMMD4Q9H0A8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.263-201ENST00000364659 114 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 SNORD50B-201ENST00000364995 70 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.310-201ENST00000365063 113 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 RNU6-1323P-201ENST00000384025 107 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 AC024067.1-201ENST00000426199 223 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 RNA5SP458-201ENST00000516188 119 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 RNU7-110P-201ENST00000516891 62 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 SNORA18.7-201ENST00000516910 131 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 RNU7-116P-201ENST00000516940 62 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 POLR3GP1-201ENST00000594073 261 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 DEFB117-201ENST00000602356 141 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 AL121655.1-201ENST00000605811 308 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 AC011373.1-201ENST00000607270 237 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 AL138825.1-201ENST00000618587 192 ntBASIC0.82□□□□□ -2.28
COMMD4Q9H0A8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 SNORD81.1-201ENST00000363064 77 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 RNA5SP264-201ENST00000363115 107 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.252-201ENST00000364556 101 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.327-201ENST00000365201 102 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 RNU6-53P-201ENST00000365367 106 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.368-201ENST00000365547 113 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 SNORD14.1-201ENST00000365609 90 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.456-201ENST00000384232 111 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 AL590004.1-201ENST00000405321 300 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 RNU6-507P-201ENST00000516045 100 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 SNORA40.14-201ENST00000516543 86 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 AC093027.1-201ENST00000546698 429 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 MIR4769-201ENST00000584126 77 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 AL606534.2-204ENST00000635008 178 ntBASIC0.81□□□□□ -2.28
COMMD4Q9H0A8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.5-201ENST00000362334 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.58-201ENST00000362807 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.80-201ENST00000362996 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.154-201ENST00000363624 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 RNU6-392P-201ENST00000364926 101 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 RNY3P1-201ENST00000365085 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 RNU1-115P-201ENST00000365329 160 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 RNY3-201ENST00000365484 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 Y_RNA.485-201ENST00000384395 102 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 MIR15B-201ENST00000385045 98 ntBASIC0.8□□□□□ -2.28
COMMD4Q9H0A8 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 262.4 ms