Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ELOCP21-201ENST00000412558 336 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 AC090897.1-201ENST00000580909 226 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 POLR3GP2-201ENST00000588366 668 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 AC092807.2-201ENST00000609367 243 ntBASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.28□□□□□ -2.45
UPF3BQ9BZI7 MIR593-201ENST00000384856 100 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 MTND2P18-201ENST00000419962 1030 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 MTND4LP11-201ENST00000422184 280 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU7-125P-201ENST00000458760 62 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 AC010486.3-201ENST00000511602 785 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6-848P-201ENST00000515948 107 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6-617P-201ENST00000516147 107 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6-473P-201ENST00000516164 107 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 AC009094.1-201ENST00000564443 426 ntBASIC-0.29□□□□□ -2.46
UPF3BQ9BZI7 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 RNU4-66P-201ENST00000365199 138 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 MIR610-201ENST00000385139 96 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 MIR644A-201ENST00000385262 94 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 MIR643-201ENST00000385267 97 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 RNU6-205P-201ENST00000390858 107 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 MTCO2P19-201ENST00000427513 598 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 AC074198.2-201ENST00000508153 258 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 ACA59.1-201ENST00000515966 143 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 MIR4264-201ENST00000583520 66 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 AC092447.9-201ENST00000603395 144 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 AP000753.3-201ENST00000604083 169 ntBASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.3□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 MIR145-201ENST00000384967 88 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 MIR938-201ENST00000401216 83 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 MTND1P27-201ENST00000451117 902 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 RNA5SP401-201ENST00000515920 127 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 RNU6-830P-201ENST00000516353 107 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 RNU6-759P-201ENST00000516740 103 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 AC090617.3-201ENST00000573670 475 ntBASIC-0.31□□□□□ -2.46
UPF3BQ9BZI7 SNORA36.1-201ENST00000363424 132 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 SNORD50B-201ENST00000364995 70 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 SNORD37.1-201ENST00000390968 65 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 PCNPP3-201ENST00000393579 471 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 USMG5P1-201ENST00000425964 177 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 AC092447.3-201ENST00000426027 686 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 AL031667.1-201ENST00000440222 725 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 RNU6-329P-201ENST00000459618 107 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 AC010525.2-201ENST00000590920 195 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 MIR6755-201ENST00000619993 66 ntBASIC-0.32□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 RNU4-20P-201ENST00000365601 151 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 MIR570-201ENST00000384917 97 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 MIR548H2-201ENST00000408874 88 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 MLLT10P1-201ENST00000418346 262 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 BTF3P11-201ENST00000426582 477 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 UQCRBP2-201ENST00000447827 297 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 RPL17P19-201ENST00000489069 552 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AC060788.1-201ENST00000521318 469 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AC093023.1-201ENST00000547375 507 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 MIR3915-201ENST00000578518 97 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AC008608.1-201ENST00000603910 127 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 AL670379.3-201ENST00000605040 251 ntBASIC-0.33□□□□□ -2.46
UPF3BQ9BZI7 SNORA72.1-201ENST00000363485 129 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 RNU6-674P-201ENST00000363831 107 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 RNU6-454P-201ENST00000364292 107 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 MIR514A2-201ENST00000385131 88 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 MIR514A3-201ENST00000385132 88 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 RNU6-261P-201ENST00000459506 102 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 SNORA25.10-201ENST00000515926 124 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
UPF3BQ9BZI7 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 SNORA51.10-201ENST00000384418 136 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 RNU6-125P-201ENST00000384505 107 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 MT-TH-201ENST00000387441 69 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 MTCO2P33-201ENST00000402100 465 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 AL353193.1-201ENST00000421444 268 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 AL365203.2-201ENST00000423444 196 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 MTND3P23-201ENST00000431980 347 ntBASIC-0.35□□□□□ -2.47
UPF3BQ9BZI7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms