Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3□□□□□ -1.93
TRAIPQ9BWF2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRAIPQ9BWF2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3□□□□□ -1.93
TRAIPQ9BWF2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 RNU6-163P-201ENST00000384396 106 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 MIR17-201ENST00000385012 84 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 MIR522-201ENST00000385071 87 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 RNU2-52P-201ENST00000410680 190 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 AC009310.1-201ENST00000414414 451 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 SNORD11-201ENST00000459124 84 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 RNU6-1299P-201ENST00000516316 100 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 RNU6-861P-201ENST00000516745 106 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 SNORA31.15-201ENST00000516771 132 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 RNU6-826P-201ENST00000516827 104 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
TRAIPQ9BWF2 SNORD14E-201ENST00000364009 85 ntBASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 Y_RNA.357-201ENST00000365487 109 ntBASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 RNU2-55P-201ENST00000411146 174 ntBASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRAIPQ9BWF2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 RNU6-312P-201ENST00000364629 107 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 RNU6-275P-201ENST00000364910 107 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 Y_RNA.622-201ENST00000411091 108 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 SCARNA8-201ENST00000515924 131 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 RNA5SP82-201ENST00000516707 92 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 AL021707.8-201ENST00000609428 183 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 AC108706.1-201ENST00000611053 297 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 Pinc.1-201ENST00000616452 154 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 FTX_2.1-201ENST00000618816 94 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 U6.106-201ENST00000636360 105 ntBASIC2.97□□□□□ -1.93
TRAIPQ9BWF2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 U8.5-201ENST00000364528 136 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 HMGN2P32-201ENST00000444648 269 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RN7SL429P-201ENST00000479090 223 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RN7SL489P-201ENST00000486185 223 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RN7SL327P-201ENST00000488659 223 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 CYCTP-201ENST00000504253 315 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RNU6-1219P-201ENST00000516143 112 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RNA5SP282-201ENST00000516355 108 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RNU7-149P-201ENST00000516739 59 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 AC109810.1-201ENST00000534066 224 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 MIR4762-201ENST00000585261 75 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 ZNF861P-201ENST00000588126 639 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 MIR6895-201ENST00000613497 78 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RN7SL853P-201ENST00000617250 223 ntBASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRAIPQ9BWF2 RNU4-82P-201ENST00000362443 140 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 RNA5SP126-201ENST00000365092 109 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.432-201ENST00000384087 111 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 RNU2-70P-201ENST00000410718 179 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 AC096725.1-201ENST00000514266 313 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 SNORA9.3-201ENST00000516383 129 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 AC120024.3-201ENST00000603167 156 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 ICE2P2-201ENST00000483823 2787 ntBASIC2.95□□□□□ -1.94
TRAIPQ9BWF2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.23-201ENST00000362496 106 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 RNU6-442P-201ENST00000383968 104 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 RNU6-301P-201ENST00000384277 107 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.555-201ENST00000384673 110 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 MIR196B-201ENST00000384852 84 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 MIR15B-201ENST00000385045 98 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 RNU7-12P-201ENST00000516030 62 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 SNORD77.4-201ENST00000516158 81 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 MIR4713-201ENST00000582691 75 ntBASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAIPQ9BWF2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.150-201ENST00000363562 102 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 SNORA67.4-201ENST00000384688 142 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 SNORD45.4-201ENST00000516629 73 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 MIR4299-201ENST00000577899 72 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 MIR5694-201ENST00000581190 76 ntBASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAIPQ9BWF2 RNU6-682P-201ENST00000363843 106 ntBASIC2.92□□□□□ -1.94
TRAIPQ9BWF2 RNU6-1138P-201ENST00000365359 106 ntBASIC2.92□□□□□ -1.94
TRAIPQ9BWF2 RNU6-209P-201ENST00000384118 107 ntBASIC2.92□□□□□ -1.94
TRAIPQ9BWF2 PGBD4P5-201ENST00000445958 426 ntBASIC2.92□□□□□ -1.94
TRAIPQ9BWF2 RNA5SP168-201ENST00000516642 112 ntBASIC2.92□□□□□ -1.94
TRAIPQ9BWF2 AC021506.2-201ENST00000612354 169 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms